Showing posts with label biomolecules. Show all posts
Showing posts with label biomolecules. Show all posts

Sunday, June 22, 2014

Food Tests

Benedict's Test for Reducing Sugars
  • Pour 2cmof solution sample solution into a test tube and add an equal volume of Benedict's solution. 
  • Shake the mixture.
  • Heat test tube in a boiling water bath for 5 minutes.
  • Record observation after 5 minutes.
Colour of precipitate and the corresponding amount of reducing sugar present
http://brilliantbiologystudent.weebly.com/uploads/1/4/8/3/14836282/44628.jpg?513

Biuret's Test for Proteins
  • Add 2cmof sample solution to a clean test tube and add 2cmof dilute sodium hydroxide solution.
  • Shake the mixture.
  • Add 1% copper (II) sulphate solution, drop by drop. Shake mixture after every drop and observe the colour change. 
  • If mixture remains blue, no protein is present.
  • If mixture turns violet/purple, protein is present. 
Iodine Test for Starch
  • Add 2cmof sample solution to a clean test-tube, followed by a few drops of iodine solution.
  • Observe the colour change.
  • If mixture remains brown, no starch is present.
  • If mixture turns blue black, starch is present.
Ethanol Emulsion Test for Fats
  • Add 2cmof sample solution to a clean test tube and add 2cmof ethanol.
  • Shake mixture thoroughly.
  • Add 2cmof water into the test tube and shake. 
  • Record the observation.
  • If mixture remains clear, no lipid is present.
  • If a white emulsion was obtained, lipid is present. 

Condensation and Hydrolysis

Condensation and hydrolysis are reverse processes of each other.

Condensation (or dehydration synthesis) is a chemical process which by 2 molecules are combined to make a larger molecule through the loss of water. It is the process which by biomolecules are formed.

Hydrolysis is a chemical process which by a macromolecule is broken down into smaller molecules by the addition of water. Often, enzymes are needed to carry out hydrolysis, as water alone is insufficient.

image taken from: http://classconnection.s3.amazonaws.com/311/flashcards/1406311/jpg/polymers1334535675092.jpg


Friday, June 20, 2014

Biomolecules — Lipids

What are lipids?
  • lipids are insoluble in water
  • contain C, H and O
  • contain less oxygen than carbohydrates
  • made up of fatty acids and glycerol
What are fatty acids?
  • contain hydrophobic "tail" of a long hydrocarbon chain, and hydrophilic "head" which is a carboxyl group
  • can be saturated (no double bonds, no kinks) or unsaturated (double bonds and kinks in fatty acid tail)
Classification of lipids
  • simple lipids
  • compound lipids
  • steroids and sterols
Simple Lipids
  • formed by joining fatty acid with an alcohol (eg. glycerol)
  • fats (eg. triglyceride) are simple lipids
  • triglyceride structure: glycerol + 3 fatty acid tails
Compound Lipids (eg. phospholipids)
  • found in phospholipid bilayer of cell membrane
  • phospholipid structure: phosphate head + 2 fatty acid tails

Biomolecules — Carbohydrates

Carbohydrates are the most abundant biomolecule in nature. 


Function of carbohydrates
  • building blocks for larger molecules 
  • energy storage — starch (plant) and glycogen (animal)
  • structural — cellulose cell wall (plant) and chitin (insects, crabs, shrimps)
The bond between monomers of carbohydrates is known as glycosidic bond.

Monosaccharides
  • monomers of carbohydrates
  • eg. glucose, fructose, galactose
  • all monosaccharides are reducing sugars
Disaccharides
  • made up of two monosaccharides

http://i.imgur.com/2Kx8x.jpg
Polysaccharides
  • made up of many monosaccharides
What is starch? 
  • polymer of glucose molecules
  • has two components; amylose and amylopectin
  • both fit together to form a complex 3-dimensional structure which is insoluble in water
  • amylose helices are entangled in the branches of amylopectin molecules
  • each amylose chain is coiled into a helix, with six glucose residues for every complete turn of the helix — compact shape making it a complex structure for storage
  • amylopectin have many branches

What is glycogen?
  • animal equivalent of starch
  • found in liver and skeletal muscles of vertebrate animals 

Starch and glycogen (energy stores)
  • their molecules have many side branches where glucose molecules can be removed from their tips (by enzymes)
  • their insolubility stops them interfering with osmosis
  • their compactness provides an efficient way to store lots of glucose for future cellular respiration

Cellulose (long, unbranched chain)
  • most abundant organic molecule on Earth
  • major component of cell wall in plants
  • made from long, straight unbranched chains of glucose
  • chains cross-linked by H-bonds which holds them tightly together (excludes water)
  • chemically very inert and insoluble 
  • many molecules form strong fibrils
  • only some bacteria, fungi and a very small number of animals can secrete cellulase enzymes

Tuesday, March 4, 2014

Biomolecules — Proteins

Amino Acids:

The basic building blocks of proteins are amino acids. Amino acids are the monomers which form polypeptide and proteins.

Properties of Proteins:
  • sensitive to pH and heat
  • shape determines function
  • enzymes are special group of proteins
  • contain H, N, C and S
  • made up of amino acids
There are about 20 essential amino acids found in proteins, and they differ in their R group. 

Amino acids join together to form a polypeptide through the process called condensation.

Two amino acids are joined by a peptide bond to form a dipeptide via condensation. Water is formed as a by product. 

The reaction is between an amino group and a carboxyl group. 

Continued condensation leads to the addition of more amino acids and thus resulting in a polypeptide chain.

 

Structure of proteins:
  1. Primary structure --> specific linear order which amino acids join to form a polypeptide chain
  2. Secondary structure --> regular folding of segments by hydrogen bonds (α-helix and β-pleated sheet)
  3. Tertiary structure --> (only for globular proteins) overall shape of polypeptide resulting from interactions* between the R group 
  4. Quaternary structure --> association of 2 or more polypeptide chains 
*Bonds that form tertiary structures:
  • hydrogen bonds
  • ionic bonds
  • disulfide bonds
  • hydrophobic interaction
Classification of proteins (based on structure):
  • Globular --> compact and spherical structure which is soluble
  • Fibrous --> long polypeptide chains twisted around each other, forming long fibres that provide tensile strength, insoluble